Fields in the template builder
Every field in DARE Template Builder is listed below. Participants can use it to gather their details before starting on the template. Optional fields can be left blank, and conditional fields only appear when they apply.
Organism and field site
Organism
| Taxon name |
Yes |
Text |
|
| Taxonomic ID |
Recommended |
Text |
GBIF, WoRMS, AlgaeBase or NCBI, with the prefix. |
| Functional group |
Yes |
Bacteria; Phytoplankton; Heterotrophic protist; Zooplankton; Macroinvertebrate; Fish; Macrophyte; Coral; Other |
|
| Photosynthetic? |
Yes |
Yes; No |
|
| Ecosystem |
Yes |
Freshwater; Brackish; Marine |
Sets whether the salinity treatment increases or decreases. |
| Habitat |
Yes |
Lake; Pond; River; Stream; Wetland; Estuary; Coastal marine; Open ocean; Other |
|
Collection site
| Site name |
Yes |
Text |
|
| Latitude |
Yes |
Decimal degrees |
|
| Longitude |
Yes |
Decimal degrees |
|
| Collection date |
Yes |
Date (YYYY-MM-DD) |
Guideline: no more than 1–2 years before the experiment. |
Field conditions at collection
| Time collected |
Optional |
24-hour HH:MM |
Local time. |
| Water temperature |
Yes |
°C |
|
| Air temperature |
Optional |
°C |
|
| Salinity |
Yes |
Number |
As conductivity or as salinity. |
| Salinity unit |
Yes |
µS/cm (conductivity); mS/cm (conductivity); PSU (practical salinity); ppt or g/kg (absolute salinity) |
|
| Conductivity compensated to 25 °C? |
If salinity is given as conductivity |
Yes (specific conductance); No (raw conductivity); Unknown |
|
Further water chemistry at the time of collection (if available)
| Dissolved oxygen |
Optional |
Number |
|
| Oxygen unit |
Required if dissolved oxygen is given |
mg/L; % saturation |
|
| Total nitrogen |
Optional |
µg/L |
|
| Total phosphorus |
Optional |
µg/L |
|
| Total carbon |
Optional |
mg/L |
|
| Chloride |
Optional |
mg/L |
|
| Particulate carbon |
Optional |
mg/L |
|
| Particulate nitrogen |
Optional |
µg/L |
|
| Particulate phosphorus |
Optional |
µg/L |
|
| Pollution history |
Optional |
Text |
e.g. road salt runoff, agricultural inputs, wastewater. |
Genetic structure
| Clones or genotypes |
Yes |
Single clone/genotype; Mixed clones/genotypes; Wild population/genotypes not tracked; Unknown |
|
| Number of clones or genotypes |
Yes, if mixed clones/genotypes |
Whole number |
|
Culture history (only for organisms already in culture)
| Approximate generations in the lab |
Yes |
Whole number |
|
| Culture temperature |
Yes |
°C |
|
| Food or nutrient regime |
Yes |
Text |
|
| Feeding or transfer frequency |
Yes |
Text |
|
| Light:dark cycle |
Yes |
Hours light:hours dark, e.g. 16:8 |
|
| Light intensity |
Yes, photosynthetic organisms only |
µmol photons m⁻² s⁻¹ |
|
| Thermal optimum, if known |
Optional |
°C |
|
| Trait and method behind the thermal optimum |
Yes, if a thermal optimum is given |
Text |
|
Experimental medium
| Medium type |
Yes |
Natural lake, river, estuarine or seawater; Filtered natural water; Standard culture medium; Other |
|
| Medium name |
Required for standard culture media |
Text |
|
| Source water |
Optional |
Text |
|
| Filter pore size |
Yes, filtered natural water only |
µm |
|
| pH |
Recommended |
Number |
|
| Salinity |
Recommended |
Number |
As conductivity or as salinity. |
| Salinity unit |
Required if salinity is given |
µS/cm (conductivity); mS/cm (conductivity); PSU (practical salinity); ppt or g/kg (absolute salinity) |
|
| Total nitrogen |
Optional |
µg/L |
|
| Total phosphorus |
Optional |
µg/L |
|
| Modifications |
Optional |
Text |
Nutrient additions, buffering, supplements or salinity adjustments, with amounts. |
Design and treatments
| Design |
Yes |
Temperature only (single stressor); Salinity only (single stressor); Full factorial: temperature × salinity; Custom temperature × salinity combinations |
|
Temperature (designs that manipulate temperature)
| Ambient temperature |
Yes |
°C |
Average temperature during the growing season, e.g. 20 °C for a temperate lake. |
| Elevated temperature |
Yes |
Ambient + 4 °C (DARE standard); A different increase agreed with the core team |
Contact the core team before using a different increase. |
| Agreed elevated temperature |
Yes, if a different increase was agreed |
°C |
|
| Reason and who agreed it |
Yes, if a different increase was agreed |
Text |
|
| Extra levels below ambient |
Optional |
Whole number |
Spaced by the same step as ambient to elevated. |
| Extra levels above elevated |
Optional |
Whole number |
Spaced by the same step as ambient to elevated. |
| Temperature control |
Yes |
Climate-controlled chamber; Incubator; Water bath; Heating plates or system; Other |
Treatments must stay stable for the whole experiment; record the temperatures organisms actually experience. |
Temperature held constant (salinity-only designs)
| Experimental temperature |
Yes |
°C |
|
Salinity (designs that manipulate salinity)
| Salinity stress |
Yes, brackish organisms only |
Increase (2× ambient by default); Decrease (5 PSU below ambient by default) |
Freshwater organisms always get an increase and marine organisms a decrease. For brackish organisms, the direction and size are up to the participant. |
| Salinity increase (multiple of ambient) |
Yes, brackish organisms with an increase |
Number, default 2 |
The size of the increase is up to the participant. |
| Unit |
Yes |
µS/cm (conductivity); mS/cm (conductivity); PSU (practical salinity); ppt or g/kg (absolute salinity) |
Decreases are set in PSU (or ppt). |
| Ambient salinity or conductivity |
Yes |
Number |
|
| Ambient defined from |
Yes |
Measured at the collection site; Standard culture medium |
Collection site for natural or filtered water; the culture medium for artificial media. |
| Salinity decrease |
Yes, for salinity decreases |
PSU, default 5 |
The size of the decrease is up to each lab. |
| Extra levels below the stress level |
Optional, for salinity decreases |
Whole number |
Spaced by the same decrease, e.g. ambient − 10 and − 15 PSU. |
| Extra levels (multiples of ambient) |
Optional, for salinity increases |
Numbers, comma-separated |
The stress level (2× ambient, or the brackish increase chosen) is always included; add e.g. 4. |
| Salt added |
Yes, for salinity increases |
NaCl; Other salt or mixture |
|
| Salt used and core-team approval |
Yes, if a salt other than NaCl is used |
Text |
Other salts need approval from the core team before the experiment. |
| Diluted with |
Yes, for salinity decreases |
Deionized or distilled water; Lower-salinity medium; Other |
|
| Describe the diluent |
Yes, if not deionized or distilled water |
Text |
|
| Measurement method |
Yes |
Text |
Measure at the start and end of the experiment, preferably throughout. |
| Salt or water added, per treatment |
Recommended |
g/L of salt, or % of final volume as water |
Entered in the treatment list. |
Feeding during the experiment
| Feeding during the experiment |
Yes |
Text |
Food type, amount and how often, and any medium renewal. For organisms that aren’t fed, write “not fed” and describe the nutrient regime. |
Replication
| Experimental replicates |
Yes |
Whole number, default 1 |
How many times the whole experiment is run. |
| Vessels per treatment (technical replicates) |
Yes |
Whole number |
Minimum 3; 4–5 preferred. |
| Individuals per vessel |
Yes, individual-level experiments |
Whole number |
|
| Individuals measured per vessel |
Yes, individual-level experiments |
Whole number |
At each time point. |
| Run each genotype in every treatment? |
Yes, if mixed clones/genotypes |
Yes; No |
|
| Genotype IDs |
Yes, if each genotype runs in every treatment |
Text, comma-separated |
|
Measurements and sampling
Each measurement type (one per thing you record)
| What you record |
Yes |
Text |
The raw quantity, e.g. body length or chlorophyll fluorescence, not a calculated rate. |
| Response it informs |
Yes |
Population growth rate; Somatic growth rate; Body size or size distribution; Development time; Reproductive output or fecundity; Survival or survival time; Activity level; Other performance measure (agree with core team); Metabolic rate; Heat shock proteins; Osmoregulatory compounds; Lipid content or composition; Other physiological indicator |
At least one must be a performance response (the first eight). |
| Method description |
Yes |
Text |
|
| Unit |
Yes |
Text without spaces, e.g. mm, RFU, cells_mL |
|
| Measurements per individual (or per vessel) |
Yes |
Whole number, default 1 |
Repeated readings at each time point. Survival is recorded per vessel. |
| Does a higher value mean better performance? |
Yes |
Yes; No, lower is better; Depends or not applicable |
|
| Initial measurements made |
Yes |
Before treatments were applied; Right after treatments started; No initial measurement needed |
|
Sampling
| Proposed start date |
Yes |
Date (YYYY-MM-DD) |
For planning; actual dates go in the data file. |
| Acclimation before T0 |
Yes |
Days |
Typically 0. |
| Planned sampling days |
Yes |
Days, comma-separated |
Days since the start of the treatments. Start with 0 (T0) if any measurement type has an initial measurement. The last day is Te. |
| Why this duration? |
Yes |
Text |
Based on the organism’s generation time and the traits measured. |
| Record realized temperature and salinity per |
Yes |
Treatment (one incubator or bath per treatment); Vessel (each vessel measured) |
|